Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC011840.2-201ENST00000563063 1520 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC015818.8-201ENST00000587907 1519 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC069262.1-201ENST00000539058 672 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC092364.2-202ENST00000597012 1073 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CICP16-201ENST00000502609 2813 ntBASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 CR383656.2-201ENST00000548656 2254 ntBASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AC092337.1-201ENST00000568699 1129 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms