Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 AC023908.3-201ENST00000564211 3047 ntBASIC17.64■□□□□ 0.41
HPS5Q9UPZ3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 RN7SL48P-201ENST00000579283 293 ntBASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AC020922.3-201ENST00000595064 547 ntBASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AC012044.1-201ENST00000603431 297 ntBASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AC007292.2-201ENST00000593524 1812 ntBASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS5Q9UPZ3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 DPM3-202ENST00000368399 517 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AC078991.1-201ENST00000437297 610 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AC006335.1-201ENST00000445200 547 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AC006453.1-201ENST00000636037 1257 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AL603764.1-201ENST00000636452 321 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 LRRC59-203ENST00000576448 1531 ntBASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS5Q9UPZ3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 FAM45BP-202ENST00000592932 1624 ntBASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 AL157792.1-201ENST00000488281 530 ntBASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS5Q9UPZ3 AL805961.1-203ENST00000641078 1258 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms