Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 RNVU1-8-201ENST00000364272 125 ntBASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 PSMD4P1-201ENST00000433951 1109 ntBASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 AP000322.3-201ENST00000608665 388 ntBASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 AC244250.3-201ENST00000620749 366 ntBASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 AL591122.2-201ENST00000624125 1853 ntBASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHANK2Q9UPX8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 RN7SL564P-201ENST00000496309 250 ntBASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 DBP-202ENST00000593500 712 ntTSL 2 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 SHMT1P1-201ENST00000419974 1312 ntBASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHANK2Q9UPX8 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.03
SHANK2Q9UPX8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 POR-201ENST00000394893 2532 ntTSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 MIR5196-201ENST00000578146 115 ntBASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 AC018695.6-201ENST00000614011 534 ntBASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 AC002044.2-201ENST00000624910 970 ntBASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHANK2Q9UPX8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHANK2Q9UPX8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms