Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 AL022342.1-201ENST00000400363 863 ntBASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 MEIS3P1-201ENST00000495167 958 ntBASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ZNF890P-202ENST00000530367 1156 ntBASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 AC092337.1-201ENST00000568699 1129 ntBASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CTNNBIP1Q9NSA3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 AC211486.1-202ENST00000416371 468 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 AC112482.1-201ENST00000492080 688 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 AC211476.1-201ENST00000503899 468 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 AC027369.6-201ENST00000525520 931 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 AC089987.1-201ENST00000551654 2209 ntBASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.11□□□□□ -0.47
CTNNBIP1Q9NSA3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms