Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 HTR5BP-201ENST00000430851 1154 ntBASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 BANF1P1-201ENST00000553684 263 ntBASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AL358933.1-201ENST00000565046 2830 ntBASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 AL035456.1-201ENST00000456064 1369 ntBASIC13.07□□□□□ -0.32
C12orf4Q9NQ89 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 MIR940-201ENST00000401276 94 ntBASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 HIST3H2BA-201ENST00000436555 524 ntBASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 SLED1-202ENST00000512051 380 ntBASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC022145.2-201ENST00000598203 171 ntBASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 MTDHP5-201ENST00000598980 586 ntBASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms