Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC011495.1-201ENST00000498085 584 ntBASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC022137.2-201ENST00000503482 481 ntBASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC009486.1-201ENST00000569860 813 ntBASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC010326.4-201ENST00000604665 891 ntBASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 U91328.1-201ENST00000437528 223 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC022494.1-201ENST00000466044 728 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ELK1P1-201ENST00000485699 580 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 MTND2P7-201ENST00000521337 640 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 CU634019.7-201ENST00000624153 1185 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 FP236241.2-201ENST00000624906 1185 ntBASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NEUROD4Q9HD90 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 AC092135.3-201ENST00000624151 1846 ntBASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 AC138969.2-201ENST00000532739 9932 ntBASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
NEUROD4Q9HD90 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
NEUROD4Q9HD90 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.08□□□□□ -0.16
NEUROD4Q9HD90 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NEUROD4Q9HD90 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms