Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 NDUFB10P1-201ENST00000567319 521 ntBASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 AC007250.1-201ENST00000608934 338 ntBASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC6CQ9HCJ0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 AC019109.1-201ENST00000401725 1874 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 AL354702.1-201ENST00000442006 1960 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 RPL3P5-201ENST00000441645 1232 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 SORD2P-201ENST00000558556 1069 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CICP6-201ENST00000457191 2729 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 AL672207.1-201ENST00000328462 1570 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 CCT8L1P-201ENST00000465400 1674 ntBASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TNRC6CQ9HCJ0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 LINC00554-201ENST00000564841 3011 ntBASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 RNVU1-8-201ENST00000364272 125 ntBASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC6CQ9HCJ0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 CTBP2P8-201ENST00000422584 1330 ntBASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AJ011931.1-201ENST00000618749 2492 ntBASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 RN7SL494P-201ENST00000461517 304 ntBASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AC140658.4-201ENST00000561990 352 ntBASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AC010632.2-201ENST00000588369 1224 ntBASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC6CQ9HCJ0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms