Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 AC093433.1-201ENST00000458048 571 ntBASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 OR2I1P-209ENST00000641730 5365 ntBASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 AC104581.4-201ENST00000623126 3052 ntBASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 FO681548.1-201ENST00000455617 1132 ntBASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF3BQ9BZI7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF3BQ9BZI7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 KRT8P35-201ENST00000483942 1338 ntBASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 ENPP7P5-201ENST00000541031 1031 ntBASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AP001063.1-201ENST00000568332 529 ntBASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.76■□□□□ 0.43
UPF3BQ9BZI7 AC140912.1-201ENST00000577171 1054 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms