Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 AC097724.1-201ENST00000609581 426 ntBASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RPAP1Q9BWH6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 IMP3P2-201ENST00000489760 475 ntBASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AC106794.1-201ENST00000506935 792 ntBASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.93■□□□□ 0.46
RPAP1Q9BWH6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 DPM3-202ENST00000368399 517 ntBASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 BNIP3P13-201ENST00000599968 566 ntBASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 AC003102.2-201ENST00000589195 1469 ntBASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 TUBBP5-203ENST00000508529 1334 ntBASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPAP1Q9BWH6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms