Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC098614.1-201ENST00000368528 745 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AL133267.1-201ENST00000398220 340 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.63□□□□□ -0.07
NPAS2Q99743 INE1-201ENST00000456273 945 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.63□□□□□ -0.07
NPAS2Q99743 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC093726.1-201ENST00000608064 963 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 AL158212.4-201ENST00000624062 1286 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AL645728.2-202ENST00000641679 227 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC023090.2-201ENST00000625182 2110 ntBASIC14.63□□□□□ -0.07
NPAS2Q99743 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.63□□□□□ -0.07
NPAS2Q99743 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AC132938.2-201ENST00000579188 680 ntBASIC14.62□□□□□ -0.07
NPAS2Q99743 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.62□□□□□ -0.07
NPAS2Q99743 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 AL591163.1-201ENST00000641757 987 ntBASIC14.62□□□□□ -0.07
NPAS2Q99743 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPAS2Q99743 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms