Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AL590440.2-201ENST00000641973 1595 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 RPL7P3-201ENST00000441388 714 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AC002472.3-201ENST00000640124 621 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AC152010.1-201ENST00000415779 2006 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 LINC01230-201ENST00000625222 3017 ntBASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 MIR1202-201ENST00000408529 83 ntBASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AL162274.1-201ENST00000617191 1098 ntBASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 RHOXF1P1-202ENST00000635473 501 ntBASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AC215219.1-201ENST00000400706 1817 ntBASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 KHSRPP1-201ENST00000427983 1768 ntBASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSPG4P5Q96PW8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSPG4P5Q96PW8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms