Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC12.68□□□□□ -0.38
USP9XQ93008 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.68□□□□□ -0.38
USP9XQ93008 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.68□□□□□ -0.38
USP9XQ93008 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 ABCC6P2-201ENST00000526069 590 ntBASIC12.68□□□□□ -0.38
USP9XQ93008 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 DERL2-206ENST00000572834 589 ntTSL 3 BASIC12.68□□□□□ -0.38
USP9XQ93008 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.68□□□□□ -0.38
USP9XQ93008 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 AC090616.6-203ENST00000579186 1945 ntBASIC12.68□□□□□ -0.38
USP9XQ93008 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 AC024909.3-201ENST00000611513 2257 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 AC011270.2-201ENST00000624293 2550 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USP9XQ93008 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 KRT18P4-201ENST00000422599 1288 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 MAGEA7P-201ENST00000436482 942 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.67□□□□□ -0.38
USP9XQ93008 AL356000.1-201ENST00000441073 1238 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 DUX4L50-201ENST00000455245 715 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 CICP12-201ENST00000455801 843 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.67□□□□□ -0.38
USP9XQ93008 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.67□□□□□ -0.38
USP9XQ93008 AP003040.1-201ENST00000532044 1024 ntBASIC12.67□□□□□ -0.38
USP9XQ93008 KRT127P-201ENST00000547183 433 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms