Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.8■□□□□ 0.12
SHC3Q92529 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.8■□□□□ 0.12
SHC3Q92529 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.8■□□□□ 0.12
SHC3Q92529 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHC3Q92529 AC011498.7-201ENST00000624986 2027 ntBASIC15.8■□□□□ 0.12
SHC3Q92529 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHC3Q92529 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 AL928921.2-201ENST00000641325 2442 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 AC020910.6-201ENST00000623084 1459 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
SHC3Q92529 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.79■□□□□ 0.12
SHC3Q92529 AC016397.2-201ENST00000624848 1985 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.79■□□□□ 0.12
SHC3Q92529 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CROCCP4-201ENST00000457096 498 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SHC3Q92529 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.79■□□□□ 0.12
SHC3Q92529 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SHC3Q92529 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 SORD2P-201ENST00000558556 1069 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
SHC3Q92529 AL358472.3-201ENST00000608147 415 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 RHOXF1P1-202ENST00000635473 501 ntBASIC15.79■□□□□ 0.12
SHC3Q92529 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHC3Q92529 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHC3Q92529 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 PDIA3P1-201ENST00000471856 1510 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 MYO15B-237ENST00000642007 4893 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.78■□□□□ 0.12
SHC3Q92529 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 MIR1202-201ENST00000408529 83 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.78■□□□□ 0.12
SHC3Q92529 RPL7P3-201ENST00000441388 714 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 GAPDHP21-201ENST00000450301 1010 ntBASIC15.78■□□□□ 0.12
SHC3Q92529 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHC3Q92529 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.78■□□□□ 0.12
SHC3Q92529 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.78■□□□□ 0.12
SHC3Q92529 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms