Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CNN2P2-201ENST00000443536 909 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CNN2P3-201ENST00000450201 906 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 RN7SL618P-201ENST00000477850 296 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AC027369.6-201ENST00000525520 931 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AL512361.1-201ENST00000554200 418 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 TEX28P1-201ENST00000613479 1221 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 TEX28P2-201ENST00000617764 1221 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AL136317.3-201ENST00000618497 906 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AL109936.8-201ENST00000641772 604 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 KRT8P22-201ENST00000562317 1415 ntBASIC12.96□□□□□ -0.34
CCDC107Q8WV48 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CCDC107Q8WV48 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 HLA-V-204ENST00000476601 1289 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC025678.2-201ENST00000562061 970 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC051619.7-201ENST00000568314 623 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC015910.1-201ENST00000579400 975 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC079781.4-201ENST00000641908 219 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 AC027612.1-201ENST00000445234 2395 ntBASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC107Q8WV48 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms