Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AKR1C7P-201ENST00000305623 895 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AL133267.1-201ENST00000398220 340 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC142381.1-201ENST00000426099 345 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 HCG4B-203ENST00000450128 991 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AGAP10P-201ENST00000454844 2418 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC091304.2-201ENST00000564639 760 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC027307.2-201ENST00000591252 911 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 IFNL4P1-201ENST00000607083 540 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 AC092053.3-201ENST00000641308 4975 ntBASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMIM11BQ8TCY0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMIM11BQ8TCY0 USP47-202ENST00000339865 7775 ntTSL 2 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms