Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 INTS4P1-203ENST00000641008 3683 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AC140479.7-201ENST00000636301 2332 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AC232323.1-201ENST00000540724 2099 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 FAM197Y7-201ENST00000432892 766 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 U91328.1-201ENST00000437528 223 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 MESTP3-201ENST00000503460 968 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 ECM1P1-201ENST00000604092 1279 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 AC138466.3-201ENST00000619983 221 ntBASIC13.05□□□□□ -0.32
CPEB3Q8NE35 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.05□□□□□ -0.32
CPEB3Q8NE35 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.04□□□□□ -0.32
CPEB3Q8NE35 CNN2P8-201ENST00000421872 913 ntBASIC13.04□□□□□ -0.32
CPEB3Q8NE35 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 KRT17P8-201ENST00000540749 863 ntBASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CPEB3Q8NE35 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms