Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP43Q8NDM7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC22.56■■□□□ 1.2
CFAP43Q8NDM7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP43Q8NDM7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP43Q8NDM7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP43Q8NDM7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC068867.1-201ENST00000559855 150 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AL627230.2-201ENST00000613254 655 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC025183.3-201ENST00000623526 1482 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CICP14-201ENST00000629111 2732 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 MIR645-201ENST00000385283 94 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC073869.2-201ENST00000417338 1026 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC108734.2-201ENST00000420887 1069 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 PTPN20CP-201ENST00000614090 920 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 AC023824.1-201ENST00000562945 2975 ntBASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CFAP43Q8NDM7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 MTHFR-210ENST00000641407 2387 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 KRT18P46-201ENST00000435568 1279 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 ABHD17AP9-201ENST00000561925 548 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 RN7SL357P-201ENST00000581065 298 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 CTBP2P8-201ENST00000422584 1330 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 LAP3P2-201ENST00000454686 1454 ntBASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CFAP43Q8NDM7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 HNRNPA1P58-201ENST00000403629 610 ntBASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 AC004522.1-201ENST00000419978 654 ntBASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 KRT8P1-201ENST00000557533 1207 ntBASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 AC104506.1-201ENST00000609247 429 ntBASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CFAP43Q8NDM7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms