Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC136759.1-202ENST00000530858 2194 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AL353779.1-201ENST00000434793 351 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 VDAC1P7-201ENST00000462417 847 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AL049840.4-201ENST00000602422 811 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AC093525.8-201ENST00000624099 1342 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AL158070.2-201ENST00000623713 1621 ntBASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIP4Q8N3C7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 HLA-K-203ENST00000430151 1046 ntBASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 AC092183.1-201ENST00000469884 875 ntBASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 RFPL4AP1-201ENST00000530883 850 ntBASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 AC089987.1-201ENST00000551654 2209 ntBASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLIP4Q8N3C7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 302.6 ms