Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC20.33■□□□□ 0.85
UBR1Q8IWV7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.33■□□□□ 0.84
UBR1Q8IWV7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 URAHP-205ENST00000610227 398 ntBASIC20.33■□□□□ 0.84
UBR1Q8IWV7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC20.33■□□□□ 0.84
UBR1Q8IWV7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.33■□□□□ 0.84
UBR1Q8IWV7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 PRORSD1P-202ENST00000563365 2154 ntBASIC20.32■□□□□ 0.84
UBR1Q8IWV7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 NHP2P1-201ENST00000335274 462 ntBASIC20.32■□□□□ 0.84
UBR1Q8IWV7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AL031673.1-201ENST00000611460 466 ntBASIC20.32■□□□□ 0.84
UBR1Q8IWV7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 AC011270.2-201ENST00000624293 2550 ntBASIC20.32■□□□□ 0.84
UBR1Q8IWV7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC20.32■□□□□ 0.84
UBR1Q8IWV7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 WASH7P-201ENST00000488147 1351 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 BCL2L12P1-201ENST00000508390 733 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 AL359219.1-201ENST00000556311 934 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 MIR4746-201ENST00000579802 71 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 AC007952.5-201ENST00000572818 1486 ntBASIC20.31■□□□□ 0.84
UBR1Q8IWV7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBR1Q8IWV7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms