Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC092135.3-201ENST00000624151 1846 ntBASIC13.78□□□□□ -0.2
VRK2Q86Y07 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK2Q86Y07 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.78□□□□□ -0.2
VRK2Q86Y07 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VRK2Q86Y07 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK2Q86Y07 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VRK2Q86Y07 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK2Q86Y07 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
VRK2Q86Y07 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
VRK2Q86Y07 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 TLE1P1-201ENST00000422965 589 ntBASIC13.77□□□□□ -0.21
VRK2Q86Y07 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 AC012617.1-204ENST00000586340 2305 ntBASIC13.77□□□□□ -0.21
VRK2Q86Y07 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.77□□□□□ -0.21
VRK2Q86Y07 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VRK2Q86Y07 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK2Q86Y07 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 AL138725.1-201ENST00000407347 1314 ntBASIC13.76□□□□□ -0.21
VRK2Q86Y07 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 TP53TG3HP-202ENST00000569755 579 ntBASIC13.76□□□□□ -0.21
VRK2Q86Y07 AC009486.1-201ENST00000569860 813 ntBASIC13.76□□□□□ -0.21
VRK2Q86Y07 AC092364.2-202ENST00000597012 1073 ntBASIC13.76□□□□□ -0.21
VRK2Q86Y07 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms