Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC007541.1-201ENST00000570282 1469 ntBASIC16.21■□□□□ 0.19
CDKAL1Q5VV42 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDKAL1Q5VV42 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKAL1Q5VV42 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.21■□□□□ 0.18
CDKAL1Q5VV42 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 RNA5SP421-201ENST00000516864 134 ntBASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 API5-211ENST00000534695 560 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 WFDC1-204ENST00000613603 549 ntBASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKAL1Q5VV42 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AC111170.3-201ENST00000624282 2464 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AC087499.6-201ENST00000411576 835 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AL162726.2-201ENST00000438986 1017 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 CU634019.7-201ENST00000624153 1185 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 FP236241.2-201ENST00000624906 1185 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AL157996.1-201ENST00000624684 2299 ntBASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDKAL1Q5VV42 AC009093.2-202ENST00000620513 2079 ntBASIC16.18■□□□□ 0.18
CDKAL1Q5VV42 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKAL1Q5VV42 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDKAL1Q5VV42 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms