Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 HLA-J-204ENST00000495278 958 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AL160314.3-201ENST00000556041 767 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC005962.1-201ENST00000584100 773 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC009884.2-201ENST00000603110 324 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC112220.4-201ENST00000604982 1263 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC097724.1-201ENST00000609581 426 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC069503.1-202ENST00000616576 642 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC091812.3-201ENST00000621362 345 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 CU633904.3-201ENST00000624042 1029 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC097520.1-201ENST00000624435 385 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.75■□□□□ 0.11
VARS2Q5ST30 AC008132.1-202ENST00000342005 1389 ntBASIC15.75■□□□□ 0.11
VARS2Q5ST30 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 LINC01101-201ENST00000622953 1884 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC118282.1-201ENST00000506408 765 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC245884.6-201ENST00000515672 1067 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AP000346.4-201ENST00000614827 381 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC109809.1-201ENST00000619665 545 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC073578.4-201ENST00000623945 514 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC022532.1-201ENST00000624563 1728 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARS2Q5ST30 AC013268.4-201ENST00000637413 2228 ntBASIC15.74■□□□□ 0.11
VARS2Q5ST30 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.74■□□□□ 0.11
VARS2Q5ST30 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms