Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13□□□□□ -0.33
FREM1Q5H8C1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13□□□□□ -0.33
FREM1Q5H8C1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 MRPL37P1-201ENST00000592451 1337 ntBASIC12.99□□□□□ -0.33
FREM1Q5H8C1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 PUDPP3-201ENST00000445368 636 ntBASIC12.99□□□□□ -0.33
FREM1Q5H8C1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM1Q5H8C1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 ST13P19-201ENST00000442505 1124 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 IGHJ2P-201ENST00000454480 60 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC008805.1-201ENST00000590892 364 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC016700.1-201ENST00000429424 312 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC026740.1-201ENST00000607068 791 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC084346.2-201ENST00000607097 949 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC138649.2-201ENST00000615886 705 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC027601.3-201ENST00000622907 509 ntBASIC12.98□□□□□ -0.33
FREM1Q5H8C1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.98□□□□□ -0.33
FREM1Q5H8C1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms