Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AL137783.1-201ENST00000623494 1896 ntBASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC068760.1-201ENST00000493579 1953 ntBASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC114271.1-201ENST00000612689 2813 ntBASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.41□□□□□ -0.42
ANKRD55Q3KP44 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 RPL13P2-201ENST00000440687 659 ntBASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.4□□□□□ -0.42
ANKRD55Q3KP44 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms