Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.67□□□□□ -0.38
EFNB3Q15768 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB3Q15768 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
EFNB3Q15768 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB3Q15768 MIR600HG-201ENST00000449175 5984 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 DPM3-202ENST00000368399 517 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 BCYRN1-201ENST00000418539 200 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 AC012441.2-201ENST00000444843 739 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 PUDPP3-201ENST00000445368 636 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 AC044849.1-201ENST00000519737 1188 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.66□□□□□ -0.38
EFNB3Q15768 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 MIR4783-201ENST00000580343 82 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 AL451050.2-201ENST00000606967 682 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 ACE3P-201ENST00000423435 1973 ntBASIC12.66□□□□□ -0.38
EFNB3Q15768 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
EFNB3Q15768 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
EFNB3Q15768 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
EFNB3Q15768 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.66□□□□□ -0.38
EFNB3Q15768 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 LINC01101-201ENST00000622953 1884 ntBASIC12.65□□□□□ -0.38
EFNB3Q15768 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNB3Q15768 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNB3Q15768 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNB3Q15768 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 E2F3P2-201ENST00000447755 1422 ntBASIC12.65□□□□□ -0.38
EFNB3Q15768 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
EFNB3Q15768 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB3Q15768 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms