Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 CICP16-201ENST00000502609 2813 ntBASIC13.88□□□□□ -0.19
CD47Q08722 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CD47Q08722 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 AC018665.1-201ENST00000622927 1362 ntBASIC13.88□□□□□ -0.19
CD47Q08722 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CD47Q08722 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD47Q08722 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.88□□□□□ -0.19
CD47Q08722 AC015922.1-201ENST00000421102 1152 ntBASIC13.88□□□□□ -0.19
CD47Q08722 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.88□□□□□ -0.19
CD47Q08722 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.88□□□□□ -0.19
CD47Q08722 KRT18P64-201ENST00000434946 1219 ntBASIC13.88□□□□□ -0.19
CD47Q08722 SDHAP3-202ENST00000515467 728 ntBASIC13.88□□□□□ -0.19
CD47Q08722 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.88□□□□□ -0.19
CD47Q08722 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.88□□□□□ -0.19
CD47Q08722 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.88□□□□□ -0.19
CD47Q08722 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 LINC01115-203ENST00000606068 577 ntBASIC13.88□□□□□ -0.19
CD47Q08722 AC025181.2-201ENST00000606994 802 ntBASIC13.88□□□□□ -0.19
CD47Q08722 AF228730.6-201ENST00000641497 218 ntBASIC13.88□□□□□ -0.19
CD47Q08722 AC084121.3-201ENST00000641716 218 ntBASIC13.88□□□□□ -0.19
CD47Q08722 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.88□□□□□ -0.19
CD47Q08722 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD47Q08722 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.87□□□□□ -0.19
CD47Q08722 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
CD47Q08722 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 AC019294.4-201ENST00000561777 2905 ntBASIC13.87□□□□□ -0.19
CD47Q08722 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.87□□□□□ -0.19
CD47Q08722 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.87□□□□□ -0.19
CD47Q08722 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.87□□□□□ -0.19
CD47Q08722 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.87□□□□□ -0.19
CD47Q08722 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 AC097493.3-201ENST00000509725 367 ntBASIC13.87□□□□□ -0.19
CD47Q08722 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.87□□□□□ -0.19
CD47Q08722 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.87□□□□□ -0.19
CD47Q08722 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CD47Q08722 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CD47Q08722 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms