Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 GEMIN8P4-201ENST00000380526 729 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SCN7AQ01118 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AQP7P5-201ENST00000428759 1049 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 AQP7P4-201ENST00000447083 1042 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 AQP7P2-201ENST00000453967 1041 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.93■□□□□ 0.46
SCN7AQ01118 EIF5AP2-201ENST00000585668 1047 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 PEBP1P2-201ENST00000603980 558 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 AQP7P3-201ENST00000624547 1041 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCN7AQ01118 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 PAUPAR-201ENST00000630360 2965 ntBASIC17.92■□□□□ 0.46
SCN7AQ01118 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.92■□□□□ 0.46
SCN7AQ01118 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 GRPEL2P1-201ENST00000453145 339 ntBASIC17.92■□□□□ 0.46
SCN7AQ01118 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.92■□□□□ 0.46
SCN7AQ01118 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
SCN7AQ01118 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.92■□□□□ 0.46
SCN7AQ01118 RN7SL455P-201ENST00000580629 282 ntBASIC17.92■□□□□ 0.46
SCN7AQ01118 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SCN7AQ01118 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SCN7AQ01118 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 LINC00115-201ENST00000473798 1317 ntBASIC17.92■□□□□ 0.46
SCN7AQ01118 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN7AQ01118 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN7AQ01118 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SCN7AQ01118 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 AJ011931.1-201ENST00000618749 2492 ntBASIC17.91■□□□□ 0.46
SCN7AQ01118 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCN7AQ01118 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCN7AQ01118 ALG1L7P-201ENST00000502317 768 ntBASIC17.91■□□□□ 0.46
SCN7AQ01118 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN7AQ01118 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN7AQ01118 SNORD3B-1-201ENST00000577988 758 ntBASIC17.91■□□□□ 0.46
SCN7AQ01118 AC055811.3-201ENST00000584952 686 ntBASIC17.91■□□□□ 0.46
SCN7AQ01118 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN7AQ01118 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN7AQ01118 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
SCN7AQ01118 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN7AQ01118 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN7AQ01118 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN7AQ01118 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCN7AQ01118 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms