Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MIR6746-201ENST00000620971 63 ntBASIC17.35■□□□□ 0.37
CNTNAP1P78357 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 CTBP2P8-201ENST00000422584 1330 ntBASIC17.35■□□□□ 0.37
CNTNAP1P78357 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP1P78357 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP1P78357 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AL136172.1-201ENST00000598590 1394 ntBASIC17.34■□□□□ 0.37
CNTNAP1P78357 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AC011270.2-201ENST00000624293 2550 ntBASIC17.34■□□□□ 0.37
CNTNAP1P78357 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AF274858.1-201ENST00000406288 372 ntBASIC17.34■□□□□ 0.37
CNTNAP1P78357 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP1P78357 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP1P78357 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP1P78357 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP1P78357 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP1P78357 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP1P78357 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.33■□□□□ 0.37
CNTNAP1P78357 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP1P78357 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CNTNAP1P78357 AC009093.10-201ENST00000641956 1442 ntBASIC17.33■□□□□ 0.37
CNTNAP1P78357 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 KRT17P5-201ENST00000332088 839 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 MIR1301-201ENST00000408518 82 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 RN7SKP109-201ENST00000410592 316 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 AL512306.1-201ENST00000432698 848 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 CHCHD2P2-201ENST00000503744 321 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 AC140113.1-201ENST00000603467 169 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 AC092135.3-201ENST00000624151 1846 ntBASIC17.33■□□□□ 0.36
CNTNAP1P78357 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP1P78357 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP1P78357 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP1P78357 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP1P78357 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP1P78357 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP1P78357 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP1P78357 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP1P78357 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms