Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13□□□□□ -0.33
HIST1H3AP68431 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 AP005018.1-201ENST00000525475 301 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 AC106820.3-201ENST00000561653 397 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H3AP68431 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 MIR6074-201ENST00000612054 107 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 AL358472.5-202ENST00000641448 1267 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
HIST1H3AP68431 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
HIST1H3AP68431 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 AC152010.1-201ENST00000415779 2006 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 AC087386.2-201ENST00000623212 4637 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H3AP68431 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AC090505.1-201ENST00000430515 1834 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 CU639417.3-201ENST00000624240 1404 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 TPM3P8-201ENST00000330554 643 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AL512384.1-201ENST00000406683 331 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 CD8B2-202ENST00000417670 633 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 INE1-201ENST00000456273 945 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 RNA5SP486-201ENST00000515961 83 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 MIR3197-201ENST00000582241 73 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 AC008735.3-201ENST00000596646 500 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 AC233724.13-201ENST00000598383 410 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 AC020910.5-201ENST00000623668 1865 ntBASIC12.99□□□□□ -0.33
HIST1H3AP68431 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H3AP68431 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H3AP68431 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms