Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 AC211429.1-201ENST00000415277 523 ntBASIC13.37□□□□□ -0.27
VBP1P61758 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 AC142381.1-201ENST00000426099 345 ntBASIC13.37□□□□□ -0.27
VBP1P61758 TARDBPP1-201ENST00000442013 1203 ntBASIC13.37□□□□□ -0.27
VBP1P61758 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 RNPS1P1-201ENST00000507437 918 ntBASIC13.37□□□□□ -0.27
VBP1P61758 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.37□□□□□ -0.27
VBP1P61758 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
VBP1P61758 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 PCDHA5-203ENST00000614258 4248 ntBASIC13.37□□□□□ -0.27
VBP1P61758 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VBP1P61758 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
VBP1P61758 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
VBP1P61758 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 KHSRPP1-201ENST00000427983 1768 ntBASIC13.36□□□□□ -0.27
VBP1P61758 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VBP1P61758 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VBP1P61758 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 CRYGEP-201ENST00000412192 528 ntBASIC13.36□□□□□ -0.27
VBP1P61758 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 HCG4B-203ENST00000450128 991 ntBASIC13.36□□□□□ -0.27
VBP1P61758 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.36□□□□□ -0.27
VBP1P61758 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.36□□□□□ -0.27
VBP1P61758 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.36□□□□□ -0.27
VBP1P61758 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.36□□□□□ -0.27
VBP1P61758 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 NCLP1-201ENST00000445357 1963 ntBASIC13.36□□□□□ -0.27
VBP1P61758 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.36□□□□□ -0.27
VBP1P61758 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
VBP1P61758 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VBP1P61758 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VBP1P61758 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.35□□□□□ -0.27
VBP1P61758 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VBP1P61758 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VBP1P61758 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.35□□□□□ -0.27
VBP1P61758 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VBP1P61758 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VBP1P61758 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VBP1P61758 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
VBP1P61758 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.35□□□□□ -0.27
VBP1P61758 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VBP1P61758 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
VBP1P61758 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms