Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 KRT8P44-201ENST00000441609 1350 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CKS1BP61024 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 KRT18P56-201ENST00000507275 550 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 AC079776.4-201ENST00000511039 504 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 RNA5SP415-201ENST00000517246 115 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.54□□□□□ -0.72
CKS1BP61024 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 AC068137.2-201ENST00000605408 478 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 AC026979.3-201ENST00000607315 403 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 AC004877.2-201ENST00000623941 599 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.54□□□□□ -0.72
CKS1BP61024 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS1BP61024 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS1BP61024 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS1BP61024 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
CKS1BP61024 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS1BP61024 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS1BP61024 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS1BP61024 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS1BP61024 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS1BP61024 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS1BP61024 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms