Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00315P59091 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00315P59091 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC00315P59091 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC00315P59091 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00315P59091 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC00315P59091 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC00315P59091 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC00315P59091 PKD1P5-201ENST00000532415 10291 ntBASIC10.72□□□□□ -0.69
LINC00315P59091 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
LINC00315P59091 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC098614.1-201ENST00000368528 745 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
LINC00315P59091 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00315P59091 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.71□□□□□ -0.69
LINC00315P59091 AL139094.1-201ENST00000405549 1188 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00315P59091 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC00315P59091 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC244107.1-201ENST00000442033 332 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 KRT8P35-201ENST00000483942 1338 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC026434.2-201ENST00000506094 1078 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.71□□□□□ -0.69
LINC00315P59091 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC023310.3-201ENST00000557027 670 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 AC100756.1-201ENST00000562736 682 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 AC138749.3-201ENST00000567691 622 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC00315P59091 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 AC116165.1-201ENST00000611806 668 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 MIR6074-201ENST00000612054 107 ntBASIC10.71□□□□□ -0.69
LINC00315P59091 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC00315P59091 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC00315P59091 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
LINC00315P59091 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC00315P59091 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms