Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AL138725.1-201ENST00000407347 1314 ntBASIC14.28□□□□□ -0.12
VSX2P58304 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AC004945.1-201ENST00000416738 983 ntBASIC14.28□□□□□ -0.12
VSX2P58304 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.28□□□□□ -0.12
VSX2P58304 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.28□□□□□ -0.12
VSX2P58304 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.28□□□□□ -0.12
VSX2P58304 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 AP000593.2-201ENST00000542775 1433 ntBASIC14.28□□□□□ -0.12
VSX2P58304 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 MIR4683-201ENST00000579659 81 ntBASIC14.28□□□□□ -0.12
VSX2P58304 RN7SL219P-201ENST00000582872 296 ntBASIC14.28□□□□□ -0.12
VSX2P58304 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AC138696.2-201ENST00000607376 223 ntBASIC14.28□□□□□ -0.12
VSX2P58304 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ZACNP1-201ENST00000612259 710 ntBASIC14.28□□□□□ -0.12
VSX2P58304 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VSX2P58304 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VSX2P58304 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VSX2P58304 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.27□□□□□ -0.12
VSX2P58304 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VSX2P58304 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.27□□□□□ -0.12
VSX2P58304 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 AC003102.2-201ENST00000589195 1469 ntBASIC14.27□□□□□ -0.12
VSX2P58304 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.27□□□□□ -0.12
VSX2P58304 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.27□□□□□ -0.12
VSX2P58304 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.27□□□□□ -0.12
VSX2P58304 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VSX2P58304 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 RN7SKP230-201ENST00000365642 335 ntBASIC14.27□□□□□ -0.13
VSX2P58304 RN7SKP175-201ENST00000408472 289 ntBASIC14.27□□□□□ -0.13
VSX2P58304 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VSX2P58304 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 Z93015.1-201ENST00000451718 390 ntBASIC14.27□□□□□ -0.13
VSX2P58304 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.27□□□□□ -0.13
VSX2P58304 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
VSX2P58304 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.27□□□□□ -0.13
VSX2P58304 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.27□□□□□ -0.13
VSX2P58304 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VSX2P58304 AC009093.2-202ENST00000620513 2079 ntBASIC14.27□□□□□ -0.13
VSX2P58304 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
VSX2P58304 CICP23-201ENST00000605013 2741 ntBASIC14.27□□□□□ -0.13
VSX2P58304 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.27□□□□□ -0.13
VSX2P58304 AL023775.1-201ENST00000454907 1746 ntBASIC14.27□□□□□ -0.13
VSX2P58304 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VSX2P58304 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.26□□□□□ -0.13
VSX2P58304 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VSX2P58304 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.26□□□□□ -0.13
VSX2P58304 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms