Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 AL022328.3-201ENST00000607943 679 ntBASIC15.14■□□□□ 0.01
CDH4P55283 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH4P55283 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH4P55283 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH4P55283 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH4P55283 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH4P55283 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 AC018735.1-201ENST00000437208 1502 ntBASIC15.13■□□□□ 0.01
CDH4P55283 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 CICP24-201ENST00000605464 2705 ntBASIC15.13■□□□□ 0.01
CDH4P55283 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH4P55283 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH4P55283 AC004898.1-201ENST00000451057 766 ntBASIC15.13■□□□□ 0.01
CDH4P55283 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 AC126915.1-201ENST00000522847 1038 ntBASIC15.13■□□□□ 0.01
CDH4P55283 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH4P55283 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 MIR6720-201ENST00000611664 98 ntBASIC15.13■□□□□ 0.01
CDH4P55283 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH4P55283 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH4P55283 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 AC015688.4-201ENST00000580780 1647 ntBASIC15.13■□□□□ 0.01
CDH4P55283 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CDH4P55283 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH4P55283 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH4P55283 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CDH4P55283 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH4P55283 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 AC009093.10-201ENST00000641956 1442 ntBASIC15.12■□□□□ 0.01
CDH4P55283 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH4P55283 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH4P55283 AC012441.2-201ENST00000444843 739 ntBASIC15.12■□□□□ 0.01
CDH4P55283 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.12■□□□□ 0.01
CDH4P55283 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH4P55283 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.12■□□□□ 0.01
CDH4P55283 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms