Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDKN2DP55273 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 AC098614.1-201ENST00000368528 745 ntBASIC14.66□□□□□ -0.06
CDKN2DP55273 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKN2DP55273 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKN2DP55273 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 AC025279.2-201ENST00000569730 653 ntBASIC14.66□□□□□ -0.06
CDKN2DP55273 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
CDKN2DP55273 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKN2DP55273 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDKN2DP55273 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKN2DP55273 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKN2DP55273 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDKN2DP55273 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKN2DP55273 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKN2DP55273 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKN2DP55273 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 TMEM14DP-201ENST00000422205 345 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2DP55273 AL590640.2-201ENST00000457038 527 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2DP55273 USP32P1-208ENST00000506594 1164 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2DP55273 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.65□□□□□ -0.06
CDKN2DP55273 AC103988.2-201ENST00000561804 725 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.65□□□□□ -0.06
CDKN2DP55273 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKN2DP55273 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 AC139712.1-201ENST00000378256 1875 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2DP55273 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 AP000593.2-201ENST00000542775 1433 ntBASIC14.65□□□□□ -0.06
CDKN2DP55273 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2DP55273 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2DP55273 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2DP55273 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDKN2DP55273 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.65□□□□□ -0.07
CDKN2DP55273 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDKN2DP55273 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKN2DP55273 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms