Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.13□□□□□ -0.15
CASP9P55211 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CASP9P55211 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.13□□□□□ -0.15
CASP9P55211 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CASP9P55211 AC104596.2-201ENST00000512793 793 ntBASIC14.13□□□□□ -0.15
CASP9P55211 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.13□□□□□ -0.15
CASP9P55211 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.13□□□□□ -0.15
CASP9P55211 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.13□□□□□ -0.15
CASP9P55211 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.13□□□□□ -0.15
CASP9P55211 AC093813.1-201ENST00000605066 256 ntBASIC14.13□□□□□ -0.15
CASP9P55211 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CASP9P55211 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 HSPA7-201ENST00000445535 1927 ntBASIC14.13□□□□□ -0.15
CASP9P55211 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 AC012617.1-204ENST00000586340 2305 ntBASIC14.13□□□□□ -0.15
CASP9P55211 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.13□□□□□ -0.15
CASP9P55211 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CASP9P55211 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 AC007541.1-201ENST00000570282 1469 ntBASIC14.12□□□□□ -0.15
CASP9P55211 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.12□□□□□ -0.15
CASP9P55211 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.12□□□□□ -0.15
CASP9P55211 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.12□□□□□ -0.15
CASP9P55211 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
CASP9P55211 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 RPL13AP25-201ENST00000484130 612 ntBASIC14.12□□□□□ -0.15
CASP9P55211 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.12□□□□□ -0.15
CASP9P55211 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.12□□□□□ -0.15
CASP9P55211 AC123567.1-201ENST00000548294 1261 ntBASIC14.12□□□□□ -0.15
CASP9P55211 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 CHCHD2P3-201ENST00000603038 451 ntBASIC14.12□□□□□ -0.15
CASP9P55211 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 AC007431.3-201ENST00000623221 587 ntBASIC14.12□□□□□ -0.15
CASP9P55211 AC008761.3-201ENST00000624803 892 ntBASIC14.12□□□□□ -0.15
CASP9P55211 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CASP9P55211 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CASP9P55211 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms