Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC007274.1-201ENST00000439805 662 ntBASIC16.2■□□□□ 0.18
NCKAP1LP55160 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 AC244394.1-201ENST00000435000 1665 ntBASIC16.2■□□□□ 0.18
NCKAP1LP55160 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCKAP1LP55160 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NCKAP1LP55160 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC009093.10-201ENST00000641956 1442 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AL157407.1-201ENST00000435784 904 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 AL645933.1-201ENST00000440087 609 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC005730.2-201ENST00000564549 1184 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 FAM45BP-202ENST00000592932 1624 ntBASIC16.19■□□□□ 0.18
NCKAP1LP55160 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.19■□□□□ 0.18
NCKAP1LP55160 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCKAP1LP55160 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.18■□□□□ 0.18
NCKAP1LP55160 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms