Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATP1B3P54709 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.99□□□□□ -0.33
ATP1B3P54709 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ATP1B3P54709 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATP1B3P54709 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ATP1B3P54709 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.99□□□□□ -0.33
ATP1B3P54709 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
ATP1B3P54709 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ATP1B3P54709 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATP1B3P54709 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.99□□□□□ -0.33
ATP1B3P54709 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.98□□□□□ -0.33
ATP1B3P54709 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.98□□□□□ -0.33
ATP1B3P54709 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ATP1B3P54709 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ATP1B3P54709 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.98□□□□□ -0.33
ATP1B3P54709 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 VDAC1P7-201ENST00000462417 847 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC104596.2-201ENST00000512793 793 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.98□□□□□ -0.33
ATP1B3P54709 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC104794.3-201ENST00000566840 1248 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 AC093512.1-201ENST00000617969 520 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC139530.3-201ENST00000620344 690 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 AP001267.2-201ENST00000532619 2086 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 AC099521.3-201ENST00000624251 2938 ntBASIC12.98□□□□□ -0.33
ATP1B3P54709 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATP1B3P54709 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ATP1B3P54709 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 AL137783.1-201ENST00000623494 1896 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ATP1B3P54709 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.97□□□□□ -0.33
ATP1B3P54709 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms