Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SMSP52788 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SMSP52788 AC113367.3-201ENST00000508316 1912 ntBASIC14.03□□□□□ -0.16
SMSP52788 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.03□□□□□ -0.16
SMSP52788 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
SMSP52788 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMSP52788 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.02□□□□□ -0.16
SMSP52788 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SMSP52788 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SMSP52788 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SMSP52788 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMSP52788 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.02□□□□□ -0.16
SMSP52788 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.02□□□□□ -0.17
SMSP52788 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 AC016694.1-201ENST00000434179 700 ntBASIC14.02□□□□□ -0.17
SMSP52788 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.02□□□□□ -0.17
SMSP52788 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.02□□□□□ -0.17
SMSP52788 TARDBPP1-201ENST00000442013 1203 ntBASIC14.02□□□□□ -0.17
SMSP52788 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.02□□□□□ -0.17
SMSP52788 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 AP001889.1-201ENST00000525414 633 ntBASIC14.02□□□□□ -0.17
SMSP52788 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.02□□□□□ -0.17
SMSP52788 AP000812.2-201ENST00000538934 718 ntBASIC14.02□□□□□ -0.17
SMSP52788 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.02□□□□□ -0.17
SMSP52788 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
SMSP52788 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.02□□□□□ -0.17
SMSP52788 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMSP52788 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMSP52788 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SMSP52788 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.02□□□□□ -0.17
SMSP52788 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.02□□□□□ -0.17
SMSP52788 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SMSP52788 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
SMSP52788 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMSP52788 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMSP52788 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMSP52788 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMSP52788 BAATP1-201ENST00000412284 1225 ntBASIC14.01□□□□□ -0.17
SMSP52788 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.01□□□□□ -0.17
SMSP52788 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.01□□□□□ -0.17
SMSP52788 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.01□□□□□ -0.17
SMSP52788 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.01□□□□□ -0.17
SMSP52788 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.01□□□□□ -0.17
SMSP52788 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.01□□□□□ -0.17
SMSP52788 AC015910.1-201ENST00000579400 975 ntBASIC14.01□□□□□ -0.17
SMSP52788 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms