Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GTF2A1P52655 AC026797.1-201ENST00000624837 2869 ntBASIC14.63□□□□□ -0.07
GTF2A1P52655 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.63□□□□□ -0.07
GTF2A1P52655 RCN1P1-201ENST00000400413 996 ntBASIC14.63□□□□□ -0.07
GTF2A1P52655 PRYP5-201ENST00000451909 266 ntBASIC14.63□□□□□ -0.07
GTF2A1P52655 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.63□□□□□ -0.07
GTF2A1P52655 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 REXO1L3P-201ENST00000622202 1288 ntBASIC14.63□□□□□ -0.07
GTF2A1P52655 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GTF2A1P52655 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.63□□□□□ -0.07
GTF2A1P52655 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.63□□□□□ -0.07
GTF2A1P52655 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GTF2A1P52655 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
GTF2A1P52655 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GTF2A1P52655 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AR-208ENST00000612452 10676 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 LINC00567-201ENST00000569854 3409 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 WASH6P-202ENST00000359512 1437 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PMS2P1-201ENST00000431037 1228 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.62□□□□□ -0.07
GTF2A1P52655 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AP000867.3-201ENST00000524675 377 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AP005117.1-201ENST00000584346 1413 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 AC092329.2-201ENST00000598402 547 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 AP001269.4-201ENST00000609611 512 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AC116407.4-201ENST00000623319 1061 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 MKRN5P-201ENST00000445263 1467 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.62□□□□□ -0.07
GTF2A1P52655 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
GTF2A1P52655 AC215219.1-201ENST00000400706 1817 ntBASIC14.62□□□□□ -0.07
GTF2A1P52655 NBN-203ENST00000409330 4523 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC14.62□□□□□ -0.07
GTF2A1P52655 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC14.61□□□□□ -0.07
GTF2A1P52655 AC124319.4-201ENST00000622931 2161 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 GBP1P1-201ENST00000394662 1740 ntBASIC14.61□□□□□ -0.07
GTF2A1P52655 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GTF2A1P52655 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC14.61□□□□□ -0.07
GTF2A1P52655 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms