Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CENPFP49454 KHSRPP1-201ENST00000427983 1768 ntBASIC16.28■□□□□ 0.2
CENPFP49454 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 AC098934.1-203ENST00000442868 1262 ntBASIC16.28■□□□□ 0.2
CENPFP49454 HIST1H2APS2-201ENST00000454426 370 ntBASIC16.28■□□□□ 0.2
CENPFP49454 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.28■□□□□ 0.2
CENPFP49454 RN7SL277P-201ENST00000481521 288 ntBASIC16.28■□□□□ 0.2
CENPFP49454 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 PRMT1P1-201ENST00000604252 1009 ntBASIC16.28■□□□□ 0.2
CENPFP49454 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.28■□□□□ 0.2
CENPFP49454 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.28■□□□□ 0.2
CENPFP49454 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 MAGEA7P-201ENST00000436482 942 ntBASIC16.28■□□□□ 0.2
CENPFP49454 RPL18AP8-201ENST00000486071 528 ntBASIC16.28■□□□□ 0.2
CENPFP49454 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.28■□□□□ 0.2
CENPFP49454 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CENPFP49454 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CENPFP49454 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPFP49454 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CENPFP49454 PPP1R2P4-201ENST00000424051 595 ntBASIC16.27■□□□□ 0.2
CENPFP49454 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPFP49454 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.27■□□□□ 0.2
CENPFP49454 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.27■□□□□ 0.2
CENPFP49454 KRT8P1-201ENST00000557533 1207 ntBASIC16.27■□□□□ 0.2
CENPFP49454 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.27■□□□□ 0.2
CENPFP49454 FBXO36P1-201ENST00000579006 471 ntBASIC16.27■□□□□ 0.2
CENPFP49454 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.27■□□□□ 0.2
CENPFP49454 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPFP49454 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.27■□□□□ 0.2
CENPFP49454 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CENPFP49454 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPFP49454 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.27■□□□□ 0.2
CENPFP49454 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.27■□□□□ 0.2
CENPFP49454 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.27■□□□□ 0.19
CENPFP49454 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.27■□□□□ 0.19
CENPFP49454 EEF1DP5-201ENST00000431410 772 ntBASIC16.27■□□□□ 0.19
CENPFP49454 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.27■□□□□ 0.19
CENPFP49454 AL118522.1-201ENST00000611368 560 ntBASIC16.27■□□□□ 0.19
CENPFP49454 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.27■□□□□ 0.19
CENPFP49454 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.27■□□□□ 0.19
CENPFP49454 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CENPFP49454 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.26■□□□□ 0.19
CENPFP49454 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.26■□□□□ 0.19
CENPFP49454 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CENPFP49454 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 AIRN-201ENST00000601203 4374 ntBASIC16.26■□□□□ 0.19
CENPFP49454 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CENPFP49454 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.26■□□□□ 0.19
CENPFP49454 DUX4L50-201ENST00000455245 715 ntBASIC16.26■□□□□ 0.19
CENPFP49454 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CENPFP49454 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.26■□□□□ 0.19
CENPFP49454 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.26■□□□□ 0.19
CENPFP49454 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms