Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC120114.3-201ENST00000611923 658 ntBASIC10.11□□□□□ -0.79
CXCL5P42830 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
CXCL5P42830 AC105339.1-204ENST00000636249 355 ntBASIC10.11□□□□□ -0.79
CXCL5P42830 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
CXCL5P42830 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CXCL5P42830 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.11□□□□□ -0.79
CXCL5P42830 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.11□□□□□ -0.79
CXCL5P42830 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.11□□□□□ -0.79
CXCL5P42830 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CXCL5P42830 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CXCL5P42830 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
CXCL5P42830 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CXCL5P42830 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.1□□□□□ -0.79
CXCL5P42830 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CXCL5P42830 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.1□□□□□ -0.79
CXCL5P42830 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC000095.1-201ENST00000603208 874 ntBASIC10.1□□□□□ -0.79
CXCL5P42830 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.1□□□□□ -0.79
CXCL5P42830 MIR6080-201ENST00000617359 66 ntBASIC10.1□□□□□ -0.79
CXCL5P42830 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CXCL5P42830 AC089987.1-201ENST00000551654 2209 ntBASIC10.1□□□□□ -0.79
CXCL5P42830 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CXCL5P42830 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CXCL5P42830 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.1□□□□□ -0.79
CXCL5P42830 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms