Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL15A1P39059 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.57■□□□□ 0.56
COL15A1P39059 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COL15A1P39059 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL15A1P39059 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 AC097065.1-201ENST00000425737 517 ntBASIC18.56■□□□□ 0.56
COL15A1P39059 AC012362.1-201ENST00000434906 739 ntBASIC18.56■□□□□ 0.56
COL15A1P39059 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.56■□□□□ 0.56
COL15A1P39059 AC114947.1-202ENST00000514136 344 ntBASIC18.56■□□□□ 0.56
COL15A1P39059 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.56■□□□□ 0.56
COL15A1P39059 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.56■□□□□ 0.56
COL15A1P39059 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.56■□□□□ 0.56
COL15A1P39059 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.56■□□□□ 0.56
COL15A1P39059 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL15A1P39059 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.56■□□□□ 0.56
COL15A1P39059 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL15A1P39059 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COL15A1P39059 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.56■□□□□ 0.56
COL15A1P39059 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
COL15A1P39059 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.56■□□□□ 0.56
COL15A1P39059 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
COL15A1P39059 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL15A1P39059 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.56■□□□□ 0.56
COL15A1P39059 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 PIN4P1-201ENST00000451079 396 ntBASIC18.55■□□□□ 0.56
COL15A1P39059 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 AC107464.3-201ENST00000609172 737 ntBASIC18.55■□□□□ 0.56
COL15A1P39059 AC009560.1-201ENST00000620208 434 ntBASIC18.55■□□□□ 0.56
COL15A1P39059 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 AJ011931.1-201ENST00000618749 2492 ntBASIC18.55■□□□□ 0.56
COL15A1P39059 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 MRPL37P1-201ENST00000592451 1337 ntBASIC18.55■□□□□ 0.56
COL15A1P39059 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL15A1P39059 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL15A1P39059 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COL15A1P39059 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.55■□□□□ 0.56
COL15A1P39059 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.55■□□□□ 0.56
COL15A1P39059 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL15A1P39059 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
COL15A1P39059 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL15A1P39059 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.54■□□□□ 0.56
COL15A1P39059 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.54■□□□□ 0.56
COL15A1P39059 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms