Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBRP36941 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBRP36941 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.97□□□□□ -0.01
LTBRP36941 RPL3P5-201ENST00000441645 1232 ntBASIC14.97□□□□□ -0.01
LTBRP36941 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LTBRP36941 RN7SL375P-201ENST00000492442 298 ntBASIC14.97□□□□□ -0.01
LTBRP36941 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.97□□□□□ -0.01
LTBRP36941 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.97□□□□□ -0.01
LTBRP36941 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.97□□□□□ -0.01
LTBRP36941 KRT18P37-201ENST00000520711 1282 ntBASIC14.97□□□□□ -0.01
LTBRP36941 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.97□□□□□ -0.01
LTBRP36941 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 AC004686.1-201ENST00000605113 538 ntBASIC14.97□□□□□ -0.01
LTBRP36941 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBRP36941 C18orf15-201ENST00000623680 2534 ntBASIC14.97□□□□□ -0.01
LTBRP36941 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBRP36941 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBRP36941 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 NHP2P1-201ENST00000335274 462 ntBASIC14.96□□□□□ -0.01
LTBRP36941 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.96□□□□□ -0.01
LTBRP36941 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.96□□□□□ -0.01
LTBRP36941 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.96□□□□□ -0.01
LTBRP36941 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.96□□□□□ -0.01
LTBRP36941 AC020658.6-201ENST00000623564 1870 ntBASIC14.96□□□□□ -0.01
LTBRP36941 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBRP36941 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.96□□□□□ -0.01
LTBRP36941 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LTBRP36941 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.96□□□□□ -0.02
LTBRP36941 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.96□□□□□ -0.02
LTBRP36941 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LTBRP36941 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms