Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL645937.2-201ENST00000396808 931 ntBASIC16.33■□□□□ 0.2
KRT9P35527 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT9P35527 AC087499.6-201ENST00000411576 835 ntBASIC16.33■□□□□ 0.2
KRT9P35527 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT9P35527 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.33■□□□□ 0.2
KRT9P35527 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.33■□□□□ 0.2
KRT9P35527 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT9P35527 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT9P35527 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.33■□□□□ 0.2
KRT9P35527 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT9P35527 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT9P35527 AL132655.2-201ENST00000596276 594 ntBASIC16.33■□□□□ 0.2
KRT9P35527 LINC02560-201ENST00000596379 459 ntBASIC16.33■□□□□ 0.2
KRT9P35527 AC093726.1-201ENST00000608064 963 ntBASIC16.33■□□□□ 0.2
KRT9P35527 MIR8072-201ENST00000614241 80 ntBASIC16.33■□□□□ 0.2
KRT9P35527 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KRT9P35527 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 AC016397.2-201ENST00000624848 1985 ntBASIC16.33■□□□□ 0.2
KRT9P35527 PTENP1-202ENST00000532280 3996 ntBASIC16.33■□□□□ 0.2
KRT9P35527 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
KRT9P35527 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT9P35527 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KRT9P35527 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT9P35527 AC134915.1-201ENST00000426461 574 ntBASIC16.32■□□□□ 0.2
KRT9P35527 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.32■□□□□ 0.2
KRT9P35527 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT9P35527 AC089987.1-201ENST00000551654 2209 ntBASIC16.32■□□□□ 0.2
KRT9P35527 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.32■□□□□ 0.2
KRT9P35527 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT9P35527 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
KRT9P35527 BRI3BPP1-201ENST00000594224 787 ntBASIC16.32■□□□□ 0.2
KRT9P35527 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT9P35527 AC093813.1-201ENST00000605066 256 ntBASIC16.32■□□□□ 0.2
KRT9P35527 AL355385.1-201ENST00000606123 409 ntBASIC16.32■□□□□ 0.2
KRT9P35527 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
KRT9P35527 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT9P35527 AC012617.1-204ENST00000586340 2305 ntBASIC16.31■□□□□ 0.2
KRT9P35527 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT9P35527 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT9P35527 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KRT9P35527 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT9P35527 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT9P35527 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT9P35527 AC123567.1-201ENST00000548294 1261 ntBASIC16.31■□□□□ 0.2
KRT9P35527 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT9P35527 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT9P35527 RN7SL204P-201ENST00000582831 262 ntBASIC16.31■□□□□ 0.2
KRT9P35527 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT9P35527 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT9P35527 AC008761.3-201ENST00000624803 892 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms