Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPS1P31327 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 PGAM1P11-201ENST00000416729 680 ntBASIC20.34■□□□□ 0.85
CPS1P31327 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 MIR4254-201ENST00000581063 76 ntBASIC20.34■□□□□ 0.85
CPS1P31327 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPS1P31327 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.34■□□□□ 0.85
CPS1P31327 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.34■□□□□ 0.85
CPS1P31327 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPS1P31327 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CPS1P31327 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CPS1P31327 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CPS1P31327 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CPS1P31327 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CPS1P31327 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CPS1P31327 AHCYP3-201ENST00000420053 1279 ntBASIC20.33■□□□□ 0.85
CPS1P31327 AC104961.1-201ENST00000427605 771 ntBASIC20.33■□□□□ 0.85
CPS1P31327 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 CDCA4P4-201ENST00000435216 680 ntBASIC20.33■□□□□ 0.85
CPS1P31327 ASS1P2-201ENST00000439895 1223 ntBASIC20.33■□□□□ 0.85
CPS1P31327 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.33■□□□□ 0.85
CPS1P31327 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.33■□□□□ 0.85
CPS1P31327 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC20.33■□□□□ 0.85
CPS1P31327 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.33■□□□□ 0.85
CPS1P31327 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.33■□□□□ 0.85
CPS1P31327 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPS1P31327 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPS1P31327 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.33■□□□□ 0.84
CPS1P31327 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CPS1P31327 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.33■□□□□ 0.84
CPS1P31327 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20.33■□□□□ 0.84
CPS1P31327 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.33■□□□□ 0.84
CPS1P31327 FAU-201ENST00000279259 461 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.32■□□□□ 0.84
CPS1P31327 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC20.32■□□□□ 0.84
CPS1P31327 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPS1P31327 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.32■□□□□ 0.84
CPS1P31327 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 SRP14-208ENST00000560773 468 ntTSL 3 BASIC20.32■□□□□ 0.84
CPS1P31327 NEK4P3-201ENST00000604859 544 ntBASIC20.32■□□□□ 0.84
CPS1P31327 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC20.32■□□□□ 0.84
CPS1P31327 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.32■□□□□ 0.84
CPS1P31327 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.32■□□□□ 0.84
CPS1P31327 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.32■□□□□ 0.84
CPS1P31327 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPS1P31327 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 PPP1R2P4-201ENST00000424051 595 ntBASIC20.32■□□□□ 0.84
CPS1P31327 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC20.32■□□□□ 0.84
CPS1P31327 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPS1P31327 AL356000.1-201ENST00000441073 1238 ntBASIC20.32■□□□□ 0.84
CPS1P31327 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC20.32■□□□□ 0.84
CPS1P31327 AC090820.1-201ENST00000519722 591 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms