Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RN7SL523P-201ENST00000484401 298 ntBASIC18.88■□□□□ 0.61
RXRBP28702 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC18.88■□□□□ 0.61
RXRBP28702 AC140658.4-201ENST00000561990 352 ntBASIC18.88■□□□□ 0.61
RXRBP28702 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.88■□□□□ 0.61
RXRBP28702 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.88■□□□□ 0.61
RXRBP28702 AC106782.5-201ENST00000616011 337 ntBASIC18.88■□□□□ 0.61
RXRBP28702 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC18.88■□□□□ 0.61
RXRBP28702 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RXRBP28702 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.88■□□□□ 0.61
RXRBP28702 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 AC067931.2-201ENST00000623655 2003 ntBASIC18.88■□□□□ 0.61
RXRBP28702 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RXRBP28702 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 RNF7-205ENST00000480908 782 ntTSL 4 BASIC18.87■□□□□ 0.61
RXRBP28702 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC18.87■□□□□ 0.61
RXRBP28702 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC18.87■□□□□ 0.61
RXRBP28702 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.87■□□□□ 0.61
RXRBP28702 AC106785.2-201ENST00000564385 1319 ntBASIC18.87■□□□□ 0.61
RXRBP28702 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.87■□□□□ 0.61
RXRBP28702 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RXRBP28702 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC18.87■□□□□ 0.61
RXRBP28702 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RXRBP28702 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RXRBP28702 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RXRBP28702 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.86■□□□□ 0.61
RXRBP28702 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 AL590440.2-201ENST00000641973 1595 ntBASIC18.86■□□□□ 0.61
RXRBP28702 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.86■□□□□ 0.61
RXRBP28702 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 AL627095.1-201ENST00000414775 321 ntBASIC18.86■□□□□ 0.61
RXRBP28702 RPL18AP16-201ENST00000424057 531 ntBASIC18.86■□□□□ 0.61
RXRBP28702 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.86■□□□□ 0.61
RXRBP28702 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.86■□□□□ 0.61
RXRBP28702 RN7SL351P-201ENST00000469306 248 ntBASIC18.86■□□□□ 0.61
RXRBP28702 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC18.86■□□□□ 0.61
RXRBP28702 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 MIR4265-201ENST00000582152 99 ntBASIC18.86■□□□□ 0.61
RXRBP28702 AC022966.2-201ENST00000587434 367 ntBASIC18.86■□□□□ 0.61
RXRBP28702 AC009041.4-201ENST00000620075 638 ntBASIC18.86■□□□□ 0.61
RXRBP28702 AC126755.5-201ENST00000622756 267 ntBASIC18.86■□□□□ 0.61
RXRBP28702 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms