Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CD40P25942 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 AC126177.1-201ENST00000547829 2218 ntBASIC12.8□□□□□ -0.36
CD40P25942 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 MYO15B-237ENST00000642007 4893 ntBASIC12.79□□□□□ -0.36
CD40P25942 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 CICP23-201ENST00000605013 2741 ntBASIC12.79□□□□□ -0.36
CD40P25942 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CD40P25942 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.79□□□□□ -0.36
CD40P25942 CICP12-201ENST00000455801 843 ntBASIC12.79□□□□□ -0.36
CD40P25942 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.79□□□□□ -0.36
CD40P25942 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CD40P25942 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AC013355.1-201ENST00000562625 723 ntBASIC12.79□□□□□ -0.36
CD40P25942 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 NDUFV2P1-201ENST00000596415 907 ntBASIC12.79□□□□□ -0.36
CD40P25942 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.79□□□□□ -0.36
CD40P25942 AL136295.7-201ENST00000619226 1200 ntBASIC12.79□□□□□ -0.36
CD40P25942 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CD40P25942 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 MRPL37P1-201ENST00000592451 1337 ntBASIC12.79□□□□□ -0.36
CD40P25942 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AC244394.1-201ENST00000435000 1665 ntBASIC12.79□□□□□ -0.36
CD40P25942 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 AL136172.1-201ENST00000598590 1394 ntBASIC12.79□□□□□ -0.36
CD40P25942 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD40P25942 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.79□□□□□ -0.36
CD40P25942 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.79□□□□□ -0.36
CD40P25942 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.79□□□□□ -0.36
CD40P25942 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.78□□□□□ -0.36
CD40P25942 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CD40P25942 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TCAF2P1-201ENST00000291129 2421 ntBASIC12.78□□□□□ -0.36
CD40P25942 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 AC016700.1-201ENST00000429424 312 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms