Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 RPSAP52-203ENST00000622976 1023 ntBASIC12.5□□□□□ -0.41
LMO1P25800 AC132938.4-201ENST00000623835 848 ntBASIC12.5□□□□□ -0.41
LMO1P25800 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LMO1P25800 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO1P25800 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LMO1P25800 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LMO1P25800 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO1P25800 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LMO1P25800 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 MSTO2P-201ENST00000314835 1709 ntBASIC12.49□□□□□ -0.41
LMO1P25800 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 AL138709.1-201ENST00000614840 1693 ntBASIC12.49□□□□□ -0.41
LMO1P25800 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 CLUHP2-201ENST00000426660 1303 ntBASIC12.49□□□□□ -0.41
LMO1P25800 MRPL37P1-201ENST00000592451 1337 ntBASIC12.49□□□□□ -0.41
LMO1P25800 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 RN7SKP230-201ENST00000365642 335 ntBASIC12.49□□□□□ -0.41
LMO1P25800 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 ALG3P1-201ENST00000508806 1114 ntBASIC12.49□□□□□ -0.41
LMO1P25800 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.49□□□□□ -0.41
LMO1P25800 AC068587.3-201ENST00000526613 355 ntBASIC12.49□□□□□ -0.41
LMO1P25800 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LMO1P25800 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LMO1P25800 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 MIR5189-201ENST00000577370 114 ntBASIC12.49□□□□□ -0.41
LMO1P25800 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 AC010319.3-201ENST00000597028 470 ntBASIC12.49□□□□□ -0.41
LMO1P25800 AC138696.2-201ENST00000607376 223 ntBASIC12.49□□□□□ -0.41
LMO1P25800 BX088702.1-201ENST00000610784 235 ntBASIC12.49□□□□□ -0.41
LMO1P25800 ENPP7P14-201ENST00000621765 1040 ntBASIC12.49□□□□□ -0.41
LMO1P25800 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LMO1P25800 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO1P25800 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO1P25800 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO1P25800 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LMO1P25800 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO1P25800 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO1P25800 MYO15B-237ENST00000642007 4893 ntBASIC12.48□□□□□ -0.41
LMO1P25800 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LMO1P25800 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO1P25800 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO1P25800 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LMO1P25800 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms