Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 KRT8P14-201ENST00000414254 1442 ntBASIC14.68□□□□□ -0.06
CDH3P22223 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH3P22223 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH3P22223 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 HLA-V-201ENST00000429037 534 ntBASIC14.68□□□□□ -0.06
CDH3P22223 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 BNIP3P42-201ENST00000454982 569 ntBASIC14.68□□□□□ -0.06
CDH3P22223 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH3P22223 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH3P22223 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH3P22223 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH3P22223 BNIP3P29-201ENST00000598302 571 ntBASIC14.68□□□□□ -0.06
CDH3P22223 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 AC011447.5-201ENST00000616168 564 ntBASIC14.68□□□□□ -0.06
CDH3P22223 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 BEND3P1-201ENST00000421591 1944 ntBASIC14.68□□□□□ -0.06
CDH3P22223 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH3P22223 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH3P22223 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH3P22223 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH3P22223 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 FAM197Y7-201ENST00000432892 766 ntBASIC14.67□□□□□ -0.06
CDH3P22223 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 FO681548.1-201ENST00000455617 1132 ntBASIC14.67□□□□□ -0.06
CDH3P22223 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH3P22223 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH3P22223 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH3P22223 AC138951.2-201ENST00000623455 1161 ntBASIC14.67□□□□□ -0.06
CDH3P22223 AC132938.4-201ENST00000623835 848 ntBASIC14.67□□□□□ -0.06
CDH3P22223 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH3P22223 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 AL138709.1-201ENST00000614840 1693 ntBASIC14.67□□□□□ -0.06
CDH3P22223 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH3P22223 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH3P22223 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH3P22223 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms